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Classification of membrane proteins including ion channels
The Transporter Classification Database (or TCDB) is an International Union of Biochemistry and Molecular Biology (IUBMB)-approved classification system
Transporter Classification Database
Transporter_Classification_Database
Protein family
proteins that belong to those subfamilies is available in the Transporter Classification Database. 1.A.72.1: The MerF Mercuric Ion (Hg²⁺) Uptake (MerF) Family
Mercury_transporter
Protein family
classified members of the KUP family can be found in the Transporter Classification Database. The E. coli protein is 622 amino acyl residues long and
Potassium_uptake_permease
Type of protein
TOG Superfamily of transport proteins as specified in the Transporter Classification Database (TCDB). Sodium/phosphate cotransporters are also known as:
Sodium/phosphate cotransporter
Sodium/phosphate_cotransporter
these subfamilies of the ILT family can be found in the Transporter Classification Database. Yeast (Saccharomyces cerevisiae, Candida albicans and Schizosaccharomyces
Iron/lead_transporter
Enzyme
transmembrane transport. These enzyme/transporters are categorized in the Transporter Classification Database (TCDB) under the Polyphosphate Polymerase/YidH
Polyphosphate_kinase
Family of putative pore-forming proteins
proteins belonging to the r1t holin family can be found in the Transporter Classification Database. The Lactococcus lactis phage r1t genome includes two adjacent
Phage_r1t_holin_family
Bacterial protein family
LIV-E transporters are categorized as electrochemical potential-driven transporters, subcategory porters (2.A.78) in the Transporter Classification Database
Branched Chain Amino Acid Exporter (LIV-E) Family
Branched_Chain_Amino_Acid_Exporter_(LIV-E)_Family
Class of transmembrane transport proteins
NP-Holin family can be found in the Transporter Classification Database. Holin Lysin Transporter Classification Database Wang, I. N.; Smith, D. L.; Young
NP-holin_family
Family of transport proteins
proteins belonging to the CitMHS family can be found in the Transporter Classification Database. Two of the characterized members of the CitMHS family, both
CitMHS_family
Family of transport proteins
proteins belonging to the MPE family can be found in the Transporter Classification Database. Members of the MPE family consist of 370-420 amino acyl
Bacterial murein precursor exporter
Bacterial_murein_precursor_exporter
belongs to the Holin Superfamily IV as classified in the Transporter Classification Database (TCDB). A representative list of members belonging to the
Cph1_holin_family
Family of transport proteins
the Transporter Classification Database. Holin Lysin Transporter Classification Database "1.E.30 The Vibrio Holin (Vibrio Holin) Family". Transporter Classification
Vibrio_holin_family
Class of transmembrane transport proteins
SPP1 Holin family can be found in Transporter Classification Database. Holin Lysin Transporter Classification Database Aunpad, Ratchaneewan; Panbangred
SPP1_holin_family
family from caudovirales and Bacillota can be found in the Transporter Classification Database. One characteristic member of the Hol44 family is oenophage
Hol44_family
family can be found in the Transporter Classification Database. Holin/Holin Superfamilies Lysin Transporter Classification Database Gindreau, E; Lonvaud-Funel
Holin_LLH_family
Proteins involved in nucleocytoplasmic transport
nucleus. They belong to the nuclear pore complex family in the transporter classification database (TCDB). Energy for transport is derived from the Ran gradient
Karyopherin
Transportation of solutes through membranes
Publishers ed.). Worth Publishers. ISBN 0-87901-711-2. "Transporter Classification Database". Archived from the original on 3 January 2014. Retrieved
Membrane_transport
2005 film by Louis Leterrier
sequel to The Transporter (2002) and the second installment in the Transporter film series, followed by Transporter 3 (2008) and The Transporter Refueled.
Transporter_2
Diverse group of small proteins
holins of the ФCP39O and ФCP26F phage. According to the Transporter Classification Database, there are a total of seven holin superfamilies. Holin superfamily
Holin
Protein family
proteins belonging to the GntP family can be found in the Transporter Classification Database. Bioinformatic analysis suggests these proteins are of about
Gluconate-proton_symporter
Class of transmembrane transport proteins
proteins belonging to the T4 holin family can be found in the Transporter Classification Database. T4 holin is fairly large, about 218 amino acyl residues
T4_holin
Protein family
Currently classified members of the SWEET transporter family can be found in the Transporter Classification Database. Plant SWEETs fall into four subclades
SWEET_transporters
Gene family
2012-05-16. Classification of ABC transporters in TCDB ABCdb Archaeal and Bacterial ABC Systems database, ABCdb ATP-Binding+cassette+transporters at the U
ABC_transporter
of members belonging to this family can be found in the Transporter Classification Database. Lambda holin S (Lysis protein S of phage lambda, holin S105;
Lambda_holin_family
Class of transmembrane transport proteins
Holin family can be found in the Transporter Classification Database (TCDB). Holin Lysin Transporter Classification Database Wang, I. N.; Smith, D. L.; Young
A-1_holin_family
Protein family
the BAH family can be found in the Transporter Classification Database. Holin Lysin Transporter Classification Database Reddy, BL; Saier, MH (2013). "Topological
Bacterial archaeal holin family
Bacterial_archaeal_holin_family
Family of transporters
NAAT family can be found in the Transporter Classification Database. A gene encoding a small neutral amino acid transporter was cloned from the genome of
6TMS neutral amino acid transporter family
6TMS_neutral_amino_acid_transporter_family
Class of transmembrane transport proteins
this family can be found in the Transporter Classification Database. Holin Lysin Transporter Classification Database Reddy, BL; Saier, MH (2013). "Topological
M1_hol_family
Family of transport proteins
proteins belonging to the MntP family can be found in the Transporter Classification Database. At least one member (YebN of E. coli, TC# 2.A.107.1.1) has
Manganese_exporter
Type of membrane protein that is permanently attached to the biological membrane
proteins responsible for cell adhesion. Classification of transporters can be found in Transporter Classification Database. As an example of the relationship
Integral_membrane_protein
Protein family
PMID 26474485. "2.A.77 The Cadmium Resistance (CadD) Family". Transporter Classification Database. Retrieved 2016-02-25. Crupper SS, Worrell V, Stewart GC
Cadmium resistance transporter
Cadmium_resistance_transporter
Protein family
representative list of these proteins is available in the Transporter Classification Database. Homologues are found in a variety of Gram-positive and Gram-negative
Clostridial_Cytotoxin_family
Family of transport proteins
superfamily III Transporter Classification Database "1.E.41. The Deinococcus/Thermus Holin (D/T-Hol) Family". Transporter Classification Database. Retrieved
Deinococcus/Thermus holin family
Deinococcus/Thermus_holin_family
Family of transport proteins
proteins that belong to the NhaA family can be found in the Transporter Classification Database. Proteins of the NhaA family are of 300-700 amino acyl residues
NhaA_family
Protein family
proteins belonging to the RhtB family can be found in the Transporter Classification Database. The transport reaction presumably catalyzed by members of
Homoserine/threonine resistance transporter
Homoserine/threonine_resistance_transporter
of transporters belonging to the Holin Superfamily IV. A representative list of its members can be found in the Transporter Classification Database. Toxigenic
TcdE_holin_family
Family of transport proteins
transport protein Transporter Classification Database Prakash S, Cooper G, Singhi S, Saier MH (December 2003). "The ion transporter superfamily". Biochimica
P-Aminobenzoyl-glutamate transporter
P-Aminobenzoyl-glutamate_transporter
Protein family
characterized members of the AE family can be found in the Transporter Classification Database. Bicarbonate (HCO3–) transport mechanisms are the principal
Anion_exchanger_family
Merging of two or more mitochondria within a cell to form a single compartment
proteins belonging to the MMF family is available in the Transporter Classification Database. 9.B.25.1.1 - The mitochondrial inner/outer membrane fusion
Mitochondrial_fusion
family can be found in the Transporter Classification Database. Holin Lysin WikiGenes: holin Transporter Classification Database Bon, J.; Mani, N.; Jayaswal
Phi11_holin_family
currently known to belong to the CstA family are listed in the Transporter Classification Database. As of early 2016, there is no crystal structural data available
Peptide transporter carbon starvation family
Peptide_transporter_carbon_starvation_family
from mycobacterial phage and cyanobacteria. Holin Lysin Transporter Classification Database Reddy, Bhaskara L.; Saier Jr., Milton H. (2013-11-01). "Topological
MP4_holin_family
Group of membrane proteins that passively export cations out of a cell
FPC and PC2 in vivo. Voltage-gated ion channel Ion channel Transporter Classification Database "1.A.5 The Polycystin Cation Channel (PCC) Family". TCDB
Polycystin cation channel family
Polycystin_cation_channel_family
Retinal-binding proteins
ion-translocating microbial rhodopsin (MR) family ("TC# 3.E.1". Transporter Classification Database (tcdb.org).) is a member of the TOG Superfamily of secondary
Microbial_rhodopsin
Family of transport proteins
Transporter (IT) Superfamily. A representative list of proteins belonging to the NhaD family can be found in the Transporter Classification Database.
NhaD_family
Membrane protein involved in transportation
enzyme that adds a phosphate group to proteins. (Grouped by Transporter Classification database categories) α-helical protein channels such as voltage-gated
Membrane_transport_protein
Family of transport proteins
Antiporter Transporter Classification Database Prakash, Shraddha; Cooper, Garret; Singhi, Soumya; Saier, Milton H. (2003-12-03). "The ion transporter superfamily"
NhaE_family
Protein family
classified members of the MIP family can be found in the Transporter Classification Database. Some of the MIP family channels include: Mammalian major
Major_intrinsic_proteins
Membrane transport proteins
disorder Amino acid Transporter Classification Database Kanai Y, Hediger MA (2004). "The glutamate/neutral amino acid transporter family SLC1: molecular
Amino_acid_transporter
Large group of transport proteins
proteins belonging to the CDF family can be found in the Transporter Classification Database. Prokaryotic and eukaryotic proteins cluster separately but
Cation_diffusion_facilitator
Family of transport proteins
presumably a sulfate transporter. Homologues currently characterized in the SulP family can be found in the Transporter Classification Database. One member of
Sulfate_permease
Protein family
ion transporters found in bacteria. A representative list of proteins belonging to the DcuC family can be found in the Transporter Classification Database
DcuC_family
Proteins that are part of, or interact with, biological membranes
across the membrane. They can be categorized according to the Transporter Classification database. Membrane enzymes may have many activities, such as oxidoreductase
Membrane_protein
Family of transport proteins
Nicotinamide Ribonucleoside (NR) Uptake Permease (PnuC) Family". Transporter Classification Database. Saier Lab Bioinformatics Group / SDSC. Foster JW, Park YK
Nicotinamide ribonucleoside uptake transporters
Nicotinamide_ribonucleoside_uptake_transporters
Transporter Classification Database. Saier, MH Jr. "2.A.26 The Branched Chain Amino Acid:Cation Symporter (LIVCS) Family". Transporter Classification
Branched chain amino acid–cation symporter
Branched_chain_amino_acid–cation_symporter
respectively. Holin Lysin Transporter Classification Database "Holin Superfamily V". Transporter Classification Database. Retrieved 2016-03-20. Reddy
Holin_superfamily_V
Class of transmembrane transport proteins
proteins belonging to the APH family can be found in the Transporter Classification Database. One of the archetype proteins in this family is the Gp5
Actinobacterial phage holin family
Actinobacterial_phage_holin_family
Class of transmembrane transport proteins
proteins belonging to the Hol-Tox family can be found in the Transporter Classification Database. Holin Lysin Reddy, Bhaskara L.; Saier Jr, Milton H. (2013)
Hol-Tox_family
Family of transport proteins
Transporter (IT) Superfamily. A representative list of proteins belonging to the NhaC family can be found in the Transporter Classification Database.
NhaC_family
Family of transport proteins
YBRG transporters Cation exchangers (CAXs) A representative list of CaCA family members can be found in the Transporter Classification Database. Members
Calcium:cation_antiporter
Group of transport proteins
SLC5A4; SLC5A5; SLC5A6; SLC5A7; SLC5A8; SLC5A9 APC Superfamily Transporter Classification Database Crystal structures: Structure of the K294A mutant of vSGLT
Sodium-solute_symporter
Family of transport proteins
mammalian betaine transporter: Sodium- and chloride-dependent betaine transporter Betaine Carnitine Choline Transporter Classification Database Saier, MH Jr
Betaine_transporter
Class of transmembrane transport proteins
Holin family can be found in the Transporter Classification Database. Holin Lysin Transporter Classification Database Reddy, BL; Saier, MH (2013). "Topological
T1_holin_family
Class of transmembrane transport proteins
B-Hol family can be found in the Transporter Classification Database. Holin Lysin Transporter Classification Database Matson, EG; Thompson, MG; Humphrey
Brachyspira_holin_family
Group of exotoxins from bacteria
domains probably mediate protein-protein interactions. The Transporter Classification Database divides the RTX-toxin superfamily into 3 different families
RTX_toxin
Family of transport proteins
These proteins and their descriptions can be found in the Transporter Classification Database. Bualuang A, Kageyama H, Tanaka Y, Incharoensakdi A, Takabe
AGCS_family
bacteria. All members of the HAAAP family can be found in the Transporter Classification Database. The generalized transport reaction catalyzed by proteins
HAAAP_family
this family can be found in the Transporter Classification Database. Holin Lysin Transporter Classification Database "BPUM_2741 - Uncharacterized protein
BhlA_holin_family
Class of transmembrane transport proteins
Dp-1 family can be found in the Transporter Classification Database. Holin Lysin Transporter Classification Database Labrie, Steve; Vukov, Natasa; Loessner
Dp-1_holin_family
Transport protein superfamily
family are shorter than 300 aas and exhibit 4 to 7 TMSs. Transporter Classification Database Chang, Abraham B.; Lin, Ron; Keith Studley, W.; Tran, Can
CPA_superfamily
Class of transmembrane transport proteins
LP-Hol family can be found in the Transporter Classification Database. Holin Lysin Transporter Classification Database Reddy, BL; Saier, MH (2013). "Topological
LP_holin_family
Group of transport proteins
in these families, can be found in the Transporter Classification Database: 2.A.3.1: The Amino Acid Transporter (AAT) Family 2.A.3.2: The Basic Amino Acid/Polyamine
APC_Family
can be found in the Transporter Classification Database. Holins Lysins Holin superfamily III Transporter Classification Database TC# 1.E.34 1.E.20 Reddy
Putative actinobacterial holin-X family
Putative_actinobacterial_holin-X_family
Class of transmembrane transport proteins
proteins belonging to the BlyA holin family can be found in the Transporter Classification Database. The BlyA membrane protein and the BlyB soluble accessory
BlyA_holin_family
members belonging to the φ29 holin family can be found in the Transporter Classification Database. The phage φ29 gene 14 encodes the protein GP14 (TC# 1.E
Phi29_holin_family
PMID 19251853. The PTS Glucose-Glucoside (Glc) Family (Transporter Classification Database, Saier Lab Group, UCSD) As of this edit, this article uses
PTS glucose-glucoside (Glc) family
PTS_glucose-glucoside_(Glc)_family
Family of transport proteins
proteins belonging to the TerC family can be found in the Transporter Classification Database. The TerC family (Pfam 03741) includes the E. coli TerC protein
Tellurium_ion_resistance
Biological database
ABCdb is a biological database for the adenosine triphosphate-binding cassette (ABC) transporters encoded by completely sequenced archaeal and bacterial
ABCdb
similar topological features. SLC20A1 Phosphate permease Transporter Classification Database Farrell, Karen B.; Tusnady, Gabor E.; Eiden, Maribeth V.
Inorganic phosphate transporter family
Inorganic_phosphate_transporter_family
Transmembrane protein that moves ions across a biological membrane
In biology, an ion transporter is a transmembrane protein that moves ions (or other small molecules) across a biological membrane to accomplish many different
Ion_transporter
this family can be found in the Transporter Classification Database. Holin Lysin Transporter Classification Database Hammerling, Michael J; Ellefson,
T7_holin_family
Class of transmembrane transport proteins
Bacillus species, is available in the Transporter Classification Database. Holin Lysin Transporter Classification Database Reddy, Bhaskara L.; Saier Jr, Milton
Bacillus spore morphogenesis and germination holin family
Bacillus_spore_morphogenesis_and_germination_holin_family
Protein family
(LysE) Superfamily. It is listed as item 2.A.116 in the Transporter Classification Database. The mechanism of its action is not known, but this family
Peptidoglycolipid addressing protein
Peptidoglycolipid_addressing_protein
Protein family
(UTC), this article is derived in whole or in part from Transporter Classification Database. The copyright holder has licensed the content in a manner
Pleurotolysin
this family can be found in the Transporter Classification Database. Holin Lysin Transporter Classification Database Schmidt, C.; Velleman, M.; Arber
LydA_holin_family
Family of transport proteins
proteins belonging to the MSS family can be found in the Transporter Classification Database. One constituent member of the MSS family, the monobasic
Malonate:Sodium_symporter
symporter 5 Transporter Classification Database Saier, MH Jr. "2.A.30 The Cation-Chloride Cotransporter (CCC) Family". Transporter Classification Database. Saier
Cation-chloride_cotransporter
Family of transport proteins
of proteins belonging to this family can be found in the Transporter Classification Database. Streptomyces aureofaciens Holin Lysin "1.E.28 The Streptomyces
Mu1/6_holin_family
Constituent of the ion transporter (IT) superfamily
101 The Malonate Uptake (MatC) Family (Formerly UIT1)". Transporter Classification Database. Retrieved 2016-03-03. Portal: Biology As of 14 March 2016
MatC_family
holin family can be found in the Transporter Classification Database. Holin Lysin Transporter Classification Database Gaeng, Susanne; Scherer, Siegfried;
P21_holin_family
Protein family
mitochondria. Mitochondrial carriers are also classified in the Transporter Classification Database. The Mitochondrial Carrier (MC) Superfamily has been expanded
Mitochondrial_carrier
the proteins belonging to this family can be found in the Transporter Classification Database. While many of the proteins belonging to this family are
3-Hol_family
Protein family
Saier, MH Jr. "1.A.16 The Formate-Nitrite Transporter (FNT) Family". Transporter Classification Database. Saier Lab Bioinformatics Group / SDSC. Falke
Formate-nitrite_transporter
Member of the Lysine Exporter (LysE) Superfamily
family, family of nickel/cobalt transporters within the TOG superfamily Nickel Cobalt Transporter Classification Database Transport protein Iwig, Jeffrey
NicO_transporters
these families are available. The seven families are in the Transporter Classification Database with the following TC numbers, names and abbreviations include:
BART_superfamily
Protein family
carrier family Active transport ATP-binding cassette transporter Transporter Classification Database Rensing C, Ghosh M, Rosen BP (October 1999). "Families
ArsB_and_ArsAB_transporters
Family of porters that belong to the CPA superfamily
proteins belonging to the NaT-DC family can be found in the Transporter Classification Database. Porters of the NaT-DC family catalyze decarboxylation of
Sodium-transporting carboxylic acid decarboxylase
Sodium-transporting_carboxylic_acid_decarboxylase
autolysin (in) → small molecules + autolysin (out) Holin Lysin Transporter Classification Database EMBL-EBI, InterPro. "Bacteriophage A118, holin (IPR009708)
Hol118_family
Class of transmembrane transport proteins
FFPP-Hol family can be found in the Transporter Classification Database. Holin Lysin Transporter Classification Database Reddy, BL; Saier, MH (2013). "Topological
Flp/Fap Pilin putative holin family
Flp/Fap_Pilin_putative_holin_family
TRANSPORTER CLASSIFICATION-DATABASE
TRANSPORTER CLASSIFICATION-DATABASE
TRANSPORTER CLASSIFICATION-DATABASE
TRANSPORTER CLASSIFICATION-DATABASE
TRANSPORTER CLASSIFICATION-DATABASE
TRANSPORTER CLASSIFICATION-DATABASE
TRANSPORTER CLASSIFICATION-DATABASE
TRANSPORTER CLASSIFICATION-DATABASE
TRANSPORTER CLASSIFICATION-DATABASE