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SOSUI is a free online tool that predicts a part of the secondary structure of proteins from a given amino acid sequence (AAS). The main objective is
SOSUI
Sosui Ichikawa (市川 素水; August 29, 1924 - March 7, 2005), was a Japanese martial artist born in Ueno, Tokyo, Japan who was the 4th Sōke of the Zen Nihon
Sosui_Ichikawa
Historic waterway in Kyoto, Japan
Lake Biwa Canal (琵琶湖疏水 or 琵琶湖疎水, Biwako Sosui) is a historic waterway in Japan connecting Lake Biwa to the nearby City of Kyoto. Constructed during the
Lake_Biwa_Canal
Japanese politician (1830–1859)
Shōzan and Asaka Gonsai. In 1851, he studied under Miyabe Teizō and Yamaga Sosui from the Higo Domain. This period of intense study suggests a formative
Yoshida_Shōin
Faction in Dragon Ball
many operatives of the Red Ribbon Army, led by Commander Red (レッド総帥, Reddo-Sōsui), serve as opponents for series protagonist Goku during his second quest
Red_Ribbon_Army
Gun) is a paramilitary organization led by Commander Red (レッド総帥, Reddo-Sōsui), who is on a quest for world domination and has his forces raid towns worldwide
List of Dragon Ball characters
List_of_Dragon_Ball_characters
Okinawan karate master (1908–1967)
students held positions in the organisation such as Tsutomu Takato and Sosui Ichikawa. In both 1961 and 1964 he travelled to Hawaii to instruct at the
Kanki_Izumigawa
Japanese animation studio
Sensou (January 13, 2002) Asu o Tsukutta Otoko - Tanabe Sakuro to Biwako Sosui (March 13, 2003) Nagasaki 1945: Angelus no Kane (September 9, 2005) Pattenrai
Mushi_Production
Episodes of Japanese anime series
with General Black. 67 "Commander Red Perishes!!" Transliteration: "Reddo Sōsui Shisu!!" (Japanese: レッド総帥死す!!) Daisuke Nishio Yasushi Hirano Mitsuo Shindō
List_of_Dragon_Ball_episodes
Japanese manga series
12 "Supreme Commander Magia Baiser Calls the Shots" Transliteration: "Sōsui Majia Bēze no Ketsudan" (Japanese: 総帥マジアベーゼの決断) Aoi Mori Noboru Kimura Aoi
Gushing_over_Magical_Girls
Human gene
PMC 1905920. PMID 17565672. Hirokawa T, Boon-Chieng S, Mitaku S (1998-05-01). "SOSUI: classification and secondary structure prediction system for membrane proteins"
Transmembrane_protein_89
2005 film
Starring Matthew Barney Björk Mayumi Miyata Shiro Nomura Tomoyuki Ogawa Sosui Oshima Cinematography Peter Strietmann Edited by Luis Alvarez y Alvarez
Drawing_Restraint_9
Protein-coding gene in the species Homo sapiens
member A". pI/MW Tool Transmembrane domain prediction SignalP 3.0 Server SOSUI System Phyre v. 2.0[permanent dead link] "RNA Folding Form". Archived from
STRIP1
19, 2018. "SAPS". EMBL-EBI. Hirikawa, T.; Boon-Chieng, S.; Mitaku, S. "SOSUI: classification and secondary structure prediction system for membrane proteins"
Ankycorbin
Protein-coding gene in humans
"NCBI: Protein". "Biology Workbench".[permanent dead link] "PSORTII". "SOSUI Hydrophobicity". Archived from the original on 2004-03-18. Retrieved 2013-05-11
CCDC144A
Protein-coding gene in the species Homo sapiens
jp/cgi-bin/runpsort.pl[permanent dead link] DTU Bioinformatics entry on c17orf98 Expasy Sosui entry on C17orf98 Protein Atlas entry on c17orf98 NCBI Unigene entry on
SPMAP1
predicted to be 0.19. Figure 3: TMEM251 predicted secondary structure from SOSUI. TMEM251 has a multitude of mutations in its 5'UTR, coding sequence, and
Transmembrane_protein_251
Protein-coding gene in the species Homo sapiens
Retrieved 2020-04-30. Hirokawa, T.; Boon-Chieng, S.; Mitaku, S. (May 1998). "SOSUI: classification and secondary structure prediction system for membrane proteins"
OCEL1
Japanese manga series
he immediately quit the company. Great Leader Kaiser Lore (総帥カイザーロアじる, Sōsui Kaizā Roajiru) Voiced by: Hidekatsu Shibata The leader of the evil organization
Miss Kuroitsu from the Monster Development Department
Miss_Kuroitsu_from_the_Monster_Development_Department
Japanese actor and singer
Teyandee, Prince 1992 Ai no Kusabi, Raoul Am Nangoku Shōnen Papuwa-kun, Magic Sōsui The Brave Fighter of Legend Da-Garn, Da-Garn 1993 The Irresponsible Captain
Show_Hayami
Mammalian protein found in Homo sapiens
Wayback Machine SOSUI Classification and Secondary Structure Prediction of Membrane Proteins, http://harrier.nagahama-i-bio.ac.jp/sosui/ Archived 2016-05-05
Cilia- and flagella-associated protein 95
Cilia-_and_flagella-associated_protein_95
Protein-coding gene in the species Homo sapiens
for QRICH2". Unigene NCBI. Archived from the original on 12 June 2015. "SOSUI, Classification and Secondary Structure Prediction". Expasy Bioinformatics
QRICH2
Protein-coding gene in humans
Isoelectric Point Service Hirokawa T, Boon-Chieng S, Mitaku S (1 May 1998). "SOSUI: classification and secondary structure prediction system for membrane proteins"
REDIC1
Large-Volume Water Transport Vehicle Japanese: 遠距離大量送水車 Hepburn: Enkyori tairyō sōsui-sha These vehicles, somewhat analogously to the High Volume Pumps used in
Firefighting_in_Japan
Season of television series
7 "No Good Deed" / "The Commander Exposed" Transliteration: "Hadaka no Sōsui" (Japanese: 裸の総帥) Mikamoto Yasumi Yamada Kenichi Komoto Shogo May 14, 2023 (2023-05-14)
Yu-Gi-Oh!_Go_Rush!!_season_2
Protein-coding gene in the species Homo sapiens
predictprotein.org/] PELE. SDSC Biology Workbench [http://workbench.sdsc.edu/] SOSUI. ExPASy BioInformatics Resource Portal [http://expasy.org/] Secretome. ExPASy
Proline and serine-rich protein 2
Proline_and_serine-rich_protein_2
Protein-coding gene in the species Homo sapiens
Bioinformatics. Archived from the original on 21 July 2020. Retrieved 11 May 2013. "SOSUI Prediction". Archived from the original on 20 March 2004. Retrieved 4 May
Protein_FAM46B
7 "No Good Deed" / "The Commander Exposed" Transliteration: "Hadaka no Sōsui" (Japanese: 裸の総帥) Mikamoto Yasumi Yamada Kenichi Komoto Shogo May 14, 2023 (2023-05-14)
List of Yu-Gi-Oh! Go Rush!! episodes
List_of_Yu-Gi-Oh!_Go_Rush!!_episodes
Dam in Gifu Prefecture, Japan
World War II as part of a large, nationwide dam building project. Sosui Gorge (蘇水峡 Sosui-kyō) was formed by the completion of the dam. Along with Ena Gorge
Maruyama_Dam
Season of television series
Ingenious Scheme" (Commander Kageyama Reiji's Clever Scheme) Transliteration: "Sōsui Kageyama Reiji no Kisaku" (Japanese: 総帥 影山零治の奇策) June 1, 2018 (2018-06-01)
Inazuma_Eleven:_Ares
Lake in Japan
three major irrigation channels of Tateshina. It is also registered on the Sosui Hyakusen, a list of the best one hundred in Japan. It was originally built
Lake_Megami
Japanese voice actor (born 1970)
Ashita no Nadja (Rosso) Fullmetal Alchemist (Delfino - ep 11) Papuwa (Magic Sōsui, Gustav) Peacemaker Kurogane (Harada Sanosuke) Zatch Bell! (Big Man, Faust
Kenji_Nomura
Protein-coding gene in humans
(Human) - C12orf42 gene & protein". www.uniprot.org. Retrieved 2016-05-03. "SOSUI/submit a protein sequence". harrier.nagahama-i-bio.ac.jp. Retrieved 2016-04-30
C12orf42
Protein-coding gene in the species Homo sapiens
Archived from the original on 6 September 2021. Retrieved 26 April 2015. "SOSUI". Classification and Secondary Structure Prediction of Membrane Proteins
C9orf152
Protein-coding gene in the species Homo sapiens
Bibcode:1992PNAS...89.2002B. doi:10.1073/pnas.89.6.2002. PMC 48584. PMID 1549558. "SOSUI: Result". harrier.nagahama-i-bio.ac.jp. Retrieved 2016-04-24. "Phobius"
TMEM241
Mammalian protein found in Homo sapiens
genscript.com. Archived from the original on 2021-07-09. Retrieved 2020-05-19. "SOSUI: Result". harrier.nagahama-i-bio.ac.jp. Retrieved 2020-05-22. "I-TASSER
C17orf78
Human protein
Retrieved 2015-03-11. Hirokawa T.; Boon-Chieng S.; Mitaku S. (1998). "SOSUI: classification and secondary structure prediction system for membrane proteins"
CXorf66
Human gene and protein
NCBI and in image B the seventh predicted transmembrane region found from SOSUI analysis was added. Amino acids in red are sites of kinase phosphorylation
TMEM19
Ribbon Army: Headquarters' Great Deciding Battle レッド総帥の最期～ブラックの野望～ Reddo Sōsui no Saigo~Burakku no Yabô~/Final Moments of Commander Red:The Plot of Black
List of Dragon Ball soundtracks
List_of_Dragon_Ball_soundtracks
Protein-coding gene in humans
peptide;however, it indicated CCDC11 to be mitochondrial. Another tool on the ExPASy, SOSUI, indicated the protein to be a soluble protein. "coiled-coil domain containing
CCDC11
Protein-coding gene in the species Homo sapiens
Localization Prediction Tool". PSORT. GenScript. Mitaku S, Hirokawa T. "SOSUI". SOSUI. Jones D. "SACS MEMSAT2 Transmembrane Prediction Page". SACS MEMSTAT2
SBK3
Human gene
Chromosome 5 open reading frame 52 [Homo sapiens]". NCBI Gene. "SOSUI Transmembrane domains". SOSUI. "Protein compositional Tool". SAPS. "Protein Structure Results"
C5orf52
July 12, 2003 50 minutes Asu o Tsukutta Otoko - Tanabe Sakuro to Biwako Sosui 明日をつくった男 田辺朔郎と琵琶湖疏水 (The Man Who Changed History - A Drannage of Lake Biwa)
List of animated feature films of 2003
List_of_animated_feature_films_of_2003
Protein found in humans
ISBN 9781588297020. Hirokawa T, Boon-Chieng S, Mitaku S (1998-05-01). "SOSUI: classification and secondary structure prediction system for membrane proteins"
Transmembrane_protein_179
Gene on human chromosome 6
It also supports the idea previous finding by PSORT II prediction and SOSUI about human C6ORF47 protein being a transmembrane protein (93.6% chance)
C6orf47
Fire department of Tokyo Metropolis, Japan
Large-Volume Water Transport Vehicle Japanese: 遠距離大量送水車 Hepburn: Enkyori tairyō sōsui-sha 8 of various types, including: 4 Hose Extension Vehicles (ホース延長車) 4
Tokyo_Fire_Department
Protein-coding gene in humans
exPASy. SIB Bioinformatics Resource Portal. Retrieved 3 May 2020. "SOSUI". SOSUI. Archived from the original on 2021-05-27. Retrieved 2020-05-03. "PSORT
WD repeat and coiled coil containing protein
WD_repeat_and_coiled_coil_containing_protein
information overview Simple Modular Architecture Research Tool (SMART) SOSUI, predicts transmembrane domains PSORT, predicts protein localisation HomoloGene
Bioinformatic_Harvester
Protein-coding gene in the species Homo sapiens
predicted transmembrane domains were identified from tests run through SOSUI. A prediction for a new signal peptide is very low and negative at -3.83
ZNF337
Protein-coding gene in humans
Isoelectric Point Service". Archived from the original on 2008-10-26. "SOSUI hydrophobicity". Archived from the original on 2004-03-18. Retrieved 2013-05-09
RUFY2
edu/CGI/BW.cgi#[permanent dead link]! "Q6ZUT6 · CCD9B_HUMAN". UniProt. "SOSUI". Reinhardt's method Bian Y, Song C, Cheng K, Dong M, Wang F, Huang J, et al
CCDC9B
"Son Goku's Charge!") 095. "The Fall of Commander Red" (レッド総帥死す!, Reddo Sōsui Shisu!; lit. "Commander Red Dies!") 096. "The Triumph!" (大勝利!!, Daishōri
List of Dragon Ball chapters (series)
List_of_Dragon_Ball_chapters_(series)
Species of bacterium
protein-coding genes. To search from transmembrane proteins, the program SOSUI was used, and tRNAscan-SE for tRNA genes. C. felis has one circular chromosome
Chlamydia_felis
Nichinaga Oumi (逢海 日永, Oumi Nichinaga), also known as the Sousui (総帥, Sōsui), is the founder of the Shadow Organization, and seeks to completely destroy
List_of_Kekkaishi_characters
Transmembrane protein in humans
PMC 8284374. PMID 33625251. "SAPS". www.ebi.ac.uk. Retrieved 2024-12-13. "SOSUI: submit protein sequences". harrier.nagahama-i-bio.ac.jp. Retrieved 2024-12-05
Allregulin
Protein-coding gene in the species Homo sapiens
Expression of c10orf76 under VEGF-A conditions". Retrieved 13 May 2013. "SOSUI Localization Prediction". Archived from the original on 15 May 2012. Retrieved
ARMH3
Extracellular protein in Homo sapiens
(2): 231–41. doi:10.1096/fasebj.14.2.231. PMID 10657980. S2CID 10475561. "SOSUI". Classification and Secondary Structure Prediction of Membrane Proteins
PRP36
Genus of wasps
Melittobia megachilis (Packard, 1864) Melittobia scapata Dahms, 1984 Melittobia sosui Dahms, 1984 "Melittobia Westwood, 1848". GBIF.org. Retrieved 24 June 2017
Melittobia
Archived from the original on 2019-04-03. Retrieved 2015-04-30. "PSORT II". "SOSUI". Su, A. I.; Wiltshire, T.; Batalov, S.; Lapp, H.; Ching, K. A.; Block,
C2orf27
Human protein-coding gene on chromosome 7
Topology". Phobius. Stockholm Bioinformatics Centre. Retrieved 1 May 2015. "SOSUI". Classification and Secondary Structure Prediction of Membrane Proteins
TRAPPC14
Protein-coding gene in the species Homo sapiens
www.atlasantibodies.com. Atlas Antibodies. Retrieved 19 December 2020. "SOSUI: Classification and secondary structure prediction for membrane proteins"
FAM110A
Cultural program of the Japanese government
琵琶湖疏水～舟に乗り、歩いて触れる明治のひととき～ Kyōto to Ōtsu o tsunagu kibō no suiro Biwako-sosui (fune ni nori, aruite fureru Meiji no hito-toki) Shiga Ōtsu [171] [172]
Japan_Heritage
Protein-coding gene in the species Homo sapiens
Gene: TMEM69 Transmembrane Protein 69". Retrieved 22 April 2012. "Expasy: SOSUI". Archived from the original on 15 May 2012. Retrieved 15 April 2012. "TMEM69"
TMEM69
Protein and gene in humans
Sequence Statistics.< EMBL-EBI". www.ebi.ac.uk. Retrieved 2020-04-30. "SOSUI WWW Server". harrier.nagahama-i-bio.ac.jp. Retrieved 2020-04-30. "CFSSP:
TMEM155
Quasi-national park in Japan
Quasi-National Park 飛騨木曽川国定公園 IUCN category V (protected landscape/seascape) Sosui Gorge near Maruyama Dam Location within Japan Location Gifu and Aichi prefectures
Hida-Kisogawa Quasi-National Park
Hida-Kisogawa_Quasi-National_Park
Protein-coding gene in the species Homo sapiens
SAPS [workbench.sdsc.edu EVI5L Statistical Analysis of Protein Sequences] "SOSUI: classification and secondary structure prediction". Archived from the original
EVI5L
Protein-coding gene in the species Homo sapiens
"SUMOplot". "SignalP". "Biology Workbench 3.2: PELE".[permanent dead link] "SOSUI". "The Human Protein Atlas". "COMPARTMENTS: FAM166B". "NCBI BLAST". "NCBI
FAM166B
Protein found in humans
TMHMM and TMAP suggests that there are no predicted transmembrane domain. SOSUI further predicts that CCDC138 is a soluble protein with no transmembrane
CCDC138
Genome Bioinformatics". "ExPASy N-glycosylation". "ExPASy Phosphorylation". "ExPASy Phyre2". "ExPASy SOSUI". Archived from the original on 2004-03-20.
Uncharacterized LOC644249 gene
Uncharacterized_LOC644249_gene
Protein-coding gene in the species Homo sapiens
Tool". ExPASy. Bioinformatics Resource Portal. Retrieved April 14, 2020. "SOSUI: Solubility Prediction". harrier.nagahama-i-bio.ac.jp. Retrieved 2020-05-01
C16orf90
81540806 (Nara-yama Tile Kiln Site) 6 3093 Lake Biwa Canal 琵琶湖疏水 Biwa-ko sosui Kyōto designation includes an area of Ōtsu in Shiga Prefecture 35°00′40″N
List of Historic Sites of Japan (Kyoto)
List_of_Historic_Sites_of_Japan_(Kyoto)
Retrieved 2024-12-07. "IntAct Portal". www.ebi.ac.uk. Retrieved 2024-12-07. "SOSUI WWW Server". harrier.nagahama-i-bio.ac.jp. Retrieved 2024-12-12. "PSORT
PROSER3
Protein-coding gene in the species Homo sapiens
ch/cgi-bin/TMPRED_form_parser Archived 2020-11-30 at the Wayback Machine "SOSUI/submit a protein sequence". harrier.nagahama-i-bio.ac.jp. Retrieved 2020-12-19
C9orf85
Protein-coding gene in the species Homo sapiens
2019-05-05. "NetGlycate 1.0 Server". www.cbs.dtu.dk. Retrieved 2019-05-05. "SOSUI WWW Server". harrier.nagahama-i-bio.ac.jp. Retrieved 2019-05-05. "Tissue
Interferon-inducible_GTPase_5
Protein
"GDS5367 / ILMN_3261382". www.ncbi.nlm.nih.gov. Retrieved 2020-05-03. "SOSUI: submit protein sequences". harrier.nagahama-i-bio.ac.jp. Retrieved 2020-05-03
TMEM221
SOSUI
SOSUI
SOSUI
SOSUI
SOSUI
SOSUI
SOSUI
SOSUI
SOSUI